METHOD FOR IDENTIFYING TOXIGENIC V CHOLERAE O1 STRAINS, DETERMINING ITS BIOVAR AND DIFFERENTIATING BIOVAR ELTOR STRAINS BY TYPICAL AND CHANGED BY MULTIPLEX POLYMERASE CHAIN REACTION, AND TEST SYSTEM FOR IMPLEMENTATION THEREOF Russian patent published in 2012 - IPC C12Q1/68 C12Q1/02 C12N15/11 

Abstract RU 2458141 C1

FIELD: medicine.

SUBSTANCE: invention concerns identifying toxigenic Vibrio cholerae O1 strains, determining their biovars and differentiating V.cholerae eltor biovars by typical isolates and changed versions. According to the invention, the multiplex polymerase chain reaction (PCR) is conducted in a single step in two reaction mixtures wherein each mixture contains a specially selected combination of primers: one - to the genes rfbO1, cas3 and ctxBclass another - to the genes rfbO1, rtxC and ctxBEltor. A test system for implementing the method comprises DNA recovery components, PCR components and result analysis components. The PCR components contain: the 10-fold buffer solution, pH 8.4, mineral oil, deionised sterile water, two positive controls, enzyme Taq-polymerase, mixed dNTP, mixed primers No.1 - rfbO1-F - rjbO1-R, cas3-F - cas3-R, ctxBclass-F- ctxBclass and mixed primers No.2 - rfbO1-F - rfbO1-R, rtxC-F - rtxC-R, ctxBEltor-F - ctxBEltor-R.

EFFECT: invention enables fast and reliable detection of serogroup cholera vibrios O1 biovar, detecting their toxigenicity and differentiating the detected toxigenic Vcholerae eltor biovar strains by typical isolates and changed versions.

3 cl, 2 dwg, 3 tbl, 1 ex

Similar patents RU2458141C1

Title Year Author Number
METHOD FOR IDENTIFICATION OF VIBRIO-CHLERAE O1 STRAINS, DETERMINATION OF THEIR TOXIGENICITY AND BIOVAR WITH DIFFERENTIATION OF EL TOR BIOVAR ON TYPICAL AND GENETICALLY CHANGED VERSIONS BY MULTIPLEX POLYMERASE CHAIN REACTION AND TEST SYSTEM FOR IMPLEMENTATION THEREOF TAKING INTO ACCOUNT RESULTS IN REAL TIME MODE 2019
  • Savelev Vilorij Nikolaevich
  • Saveleva Irina Vilorevna
  • Sosunov Vasilij Valerevich
  • Kovalev Dmitrij Anatolevich
  • Podoprigora Ekaterina Ivanovna
  • Vasileva Oksana Vasilevna
  • Guseva Lyudmila Vadimovna
RU2732448C1
METHOD OF SIMULTANEOUS IDENTIFICATION OF TOXIGENIC STRAINS OF GENOVARIANTS OF EL TOR CHOLERA CAUSATIVE AGENT AND THEIR DIFFERENTIATION ON EPIDEMIC POTENTIAL BY METHOD OF MULTIPLEX POLYMERASE CHAIN REACTION 2014
  • Zadnova Svetlana Petrovna
  • Plekhanov Nikita Aleksandrovich
  • Agafonov Dmitrij Anatol'Evich
  • Smirnova Nina Ivanovna
RU2560280C2
METHOD FOR IDENTIFICATION OF TOXIGENIC GENETIC VARIANTS OF CHOLERA CAUSATIVE AGENT EL TOR WITH SET OF MUTATIONS IN GENES OF VIRULENCE AND PANDEMIC ISLAND GENES BY MULTIPLEX POLYMERASE CHAIN REACTION 2022
  • Plekhanov Nikita Aleksandrovich
  • Rybalchenko Darya Aleksandrovna
  • Shchelkanova Elena Yurevna
  • Smirnova Nina Ivanovna
RU2815711C2
METHOD OF DIFFERENTIATION OF TOXIGENIC GENETICALLY MODIFIED STRAINS VIBRIO CHOLERAE OF BIOVAR EL TOR WITH DIFFERENT EPIDEMIC POTENTIAL BY METHOD OF MULTIPLEX POLYMERASE CHAIN REACTION AND TEST SYSTEM FOR ITS IMPLEMENTATION 2014
  • Smirnova Nina Ivanovna
  • Agafonov Dmitrij Anatol'Evich
  • Shashkova Alena Vladimirovna
  • Zadnova Svetlana Petrovna
  • Cheldyshova Nadezhda Borisovna
RU2556127C2
METHOD OF DIFFERENTIATION OF O1 VIBRIO CHOLERAE STRAINS OF EL TOR BIOTYPE WITH VARIOUS EPIDEMIOLOGICAL SIGNIFICANCE BY METHOD OF MULTIPLEX POLYMERASE CHAIN REACTION 2018
  • Agafonova Elena Yurevna
  • Agafonov Dmitrij Alekseevich
  • Smirnova Nina Ivanovna
RU2671412C1
METHOD FOR DETERMINATION OF GENETIC RELATIONSHIP OF COMMA BACILLI STRAINS BY SEQUENCING GENES FLANKING CLUSTER OF O-ANTIGEN BIOSYNTHESIS GENES 2008
  • Eroshenko Galina Aleksandrovna
  • Krasnov Jaroslav Mikhajlovich
  • Fadeeva Alevtina Viktorovna
  • Shavina Natal'Ja Jur'Evna
  • Guseva Natal'Ja Petrovna
  • Kutyrev Vladimir Viktorovich
RU2393231C1
AVIRULENT STRAIN OF Vibrio cholerae KM 263 BACTERIA OF SEROVAR INABA OF BIOVAR ELTOR - PRODUCER OF PROTECTIVE O1 ANTIGEN 2010
  • Livanova Ljudmila Fedorovna
  • Strel'Nikova-Aab Ekaterina Nikolaevna
  • Zadnova Svetlana Petrovna
  • Smirnova Nina Ivanovna
RU2425867C1
METHOD DETECTION AND EVALUATION OF BIOTYPE, SEROGROUP AND TOXIGENICITY OF CHOLERA AGENT AND RELATED KIT 2007
  • Osina Natal'Ja Aleksandrovna
  • Bugorkova Tat'Jana Vasil'Evna
  • Konnova Svetlana Sergeevna
  • Kuklev Vasilij Evgen'Evich
  • Kutyrev Vladimir Viktorovich
RU2360972C1
AVIRULENT STRAIN OF Vibrio cholerae KM 262 BACTERIA OF SEROVAR OGAWA OF BIOVAR ELTOR - PRODUCER OF PROTECTIVE O1 ANTIGEN 2010
  • Strel'Nikova-Aab Ekaterina Nikolaevna
  • Livanova Ljudmila Fedorovna
  • Gorjaev Artem Anatol'Evich
  • Zadnova Svetlana Petrovna
  • Smirnova Nina Ivanovna
RU2425868C1
STRAIN OF BACTERIA VIBRIO CHOLERAE - PRODUCER OF CHOLERAIC TOXIN OF II TYPE 2007
  • Shchelkanova Elena Jur'Evna
  • Gorjaev Artem Anatol'Evich
  • Zadnova Svetlana Petrovna
  • Smirnova Nina Ivanovna
RU2326941C1

RU 2 458 141 C1

Authors

Smirnova Nina Ivanovna

Gorjaev Artem Anatol'Evich

Shubina Alena Vladimirovna

Zadnova Svetlana Petrovna

Kutyrev Vladimir Viktorovich

Dates

2012-08-10Published

2011-03-14Filed