FIELD: biotechnology.
SUBSTANCE: described is a method for gene analysis based on shared memory, performed by a computer and comprising the steps of: reading sample data and pre-processing sample data, moreover, sample data is data generated or formed after gene sequencing of samples; performing gene analysis of the pre-processed sample data and determining whether a library file required for gene analysis is in the shared gene memory; if found, obtain the required library file from the shared gene memory, converting the desired library file into a gene analysis process of the pre-processed sample data, and performing gene analysis, the sample data contains a plurality of data groups, each data group has a corresponding sample process, each sample process is included in an area of shared gene memory to obtain the required library file. A corresponding device, a computer device, a computer-readable medium, is also described.
EFFECT: method can significantly reduce the I/O time and occupancy for loading a library file from a hard disk, therefore, the efficiency of the analysis can be improved.
12 cl, 11 dwg
Title | Year | Author | Number |
---|---|---|---|
ANALYSIS METHOD AND GENE SEQUENCING DEVICE, DATA STORAGE DEVICE AND COMPUTING DEVICE | 2022 |
|
RU2821785C2 |
METHOD FOR DETECTING CHROMOSOMAL STRUCTURAL ABNORMALITIES AND DEVICE THEREFOR | 2013 |
|
RU2654575C2 |
GENE SEQUENCING DATA PROCESSING METHOD AND GENE SEQUENCING DATA PROCESSING APPARATUS | 2020 |
|
RU2799005C2 |
METHOD AND SYSTEM FOR CORRECTING UNDESIRABLE BATCH EFFECTS IN MICROBIOME DATA | 2019 |
|
RU2742003C1 |
METHOD FOR SELECTIVE LOADING OF A SET OF MODULES, ELECTRONIC DEVICE AND DATA MEDIUM | 2014 |
|
RU2595529C2 |
BIOINFORMATIC SYSTEMS, DEVICES AND METHODS FOR PERFORMING SECONDARY AND/OR TERTIARY PROCESSING | 2017 |
|
RU2750706C2 |
BIOINFORMATION SYSTEMS, DEVICES AND METHODS FOR SECONDARY AND/OR TERTIARY PROCESSING | 2017 |
|
RU2799750C2 |
METHOD AND DEVICE FOR DETERMINATION OF GENE ASSOCIATION DEGREE | 2021 |
|
RU2790285C1 |
SYSTEM AND METHOD FOR AUTOMATIC PROCESSING OF SOFTWARE SYSTEM ERRORS | 2012 |
|
RU2521265C2 |
METHODS AND DEVICES OF ANTICIPATORY MEMORY CONTROL | 2003 |
|
RU2348067C2 |
Authors
Dates
2023-03-21—Published
2020-11-06—Filed