FIELD: physics, computer engineering.
SUBSTANCE: invention relates to a system and a method for managing virus data. The system comprises a set of graphical user interface (GUI) tools, including an import tool, an annotation tool, a browsing tool which facilitates representation of types of nucleotides and amino acids, a query tool which facilitates isolation of user-defined genetic characteristics via user-defined annotations associated with sequences, an alignment tool linked to the query tool for selecting one or more query attributes in an alignment function, a genome contig assembling tool, a phylogeny tool which assembles alignments into evolutionary trees, and a mutation analysis tool, and a data storage and retrieval system (DSRS) which is realised in a relational database management system; the DSRS storing genetic, biological, clinical, phenotypical and micro-matrix genome data, and a set of GUI tools for system management in order to manage and analyse data, the set of GUI tools and the DSRS being integrated to manage genome data without data export.
EFFECT: providing fast and flexible management of virus data.
21 cl, 18 dwg
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Authors
Dates
2014-06-27—Published
2010-01-14—Filed