SYNTHETIC OLIGONUCLEOTIDE PRIMERS FOR ACINETOBACTER BACTERIA STRAINS AND INSOLES IDENTIFICATION AND DETERMINATION OF RESISTANCE TO BETA-LACTAM ANTIBIOTICS AND THE METHOD OF THEIR USE Russian patent published in 2018 - IPC C12Q1/68 

Abstract RU 2646107 C1

FIELD: medicine.

SUBSTANCE: invention relates to medicine. Invention is a set of specific oligonucleotide primers for the Acinetobacter genus bacteria species identification and the resistance to beta-lactam antibiotics determination, comprising: 2 pairs of oligonucleotide primers for the rpoB gene amlification, with nucleotide sequences atgcgtccaggcgagccaccaac, gcggctgaaa acttattcaa taac, tctg aacgctatga cttatc, atggtcgtgtttgtccaattgaa; 3 pairs of oligonucleotide primers for the OXA-type carbapenemases genes amlification (oxa-51 and oxa-51-like), with nucleotide sequences gcaccataaggcaaccaccaca, aagtatttaaatgggatggg, agaatgggaaaagaacatgacc, ttggacttgagctcatgtctaag, gcaccataaggcaaccacccgg, aagtatttaaatgggatgcc; 2 pairs of oligonucleotide primers for the oxa-23 carbapenemase gene amlification, with nucleotide sequences atctggtgtttaaaatgaataa, gattcatcaatactttgatgaa, tggaagggcgagaaaaggtcat, ggcaagggatataaaaccacaa; 2 pairs of oligonucleotide primers for the oxa-40 carbapenemase gene amlification, with nucleotide sequences tgaagctcaaacacagggtgta, taaaaaaagaacttatcctatgtg, ccagtatatcaagagcttgcaag, ccttaaaattacaccagtacaagaag. Method for Acinetobacter bacteria identifying and determining their resistance to beta-lactam antibiotics involves the DNA isolation from the bacterial cultures bio-material samples and carrying out PCR with synthetic oligonucleotide primers, using the proposed set of oligonucleotide primers, and in the case of rpoB and oha-51 genes detection, bacteria of the Acinetobacter genus are identified, and in the presence of ocho-23 and oha-40 genes encoding carbapenemases OXA-23 and OXA-40, conclude that the analyzed strain is resistant to antibacterial drugs of the beta-lactam number.

EFFECT: invention makes it possible to identify Acinetobacter bacteria directly in a clinical material with simultaneous determination of resistance to OXA type carbapenems; and can also be used in the selection of a drug, treatment regimen and for epidemiological control.

2 cl, 2 tbl

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RU 2 646 107 C1

Authors

Baranov Aleksandr Aleksandrovich

Lazareva Anna Valerevna

Savinova Tatyana Aleksandrovna

Lapa Sergej Anatolevich

Mikhajlovich Vladimir Mikhajlovich

Gejdarov Rustam Nuraddin Ogly

Dates

2018-03-01Published

2016-12-06Filed