FIELD: biotechnology.
SUBSTANCE: molecular genetics in agriculture, used to determine the genetic resistance of cattle to the leukemia virus by identifying the *0902 allele, associated with resistance to leukemia, and the *1501 allele, associated with susceptibility to this disease, by polymerase chain reaction (PCR) with primers limiting a fragment of 216 nucleotides in length within the second exon of the bovine BOLA-DRB3 gene, followed by sequencing and computer recognition using reference sequences. The proposed method includes the BDRB32ex software script, created for computer automatic recognition of alleles of the BOLA-DRB3 gene using reference sequences. For PCR, primers ex2_for - 5 are used' -GTGTCATTTCTTCAACGGGAC-3' and ex2_rev - 5' -CGACCCCGTAGTTGTGTCTG-3'. The product of the sequence reaction is used for production on an automatic sequencer. Visualization of chromatograms is carried out using the Benchling online algorithm (https://www.benchling.com/). Alleles are determined automatically using reference sequences using the BDRB32ex software script containing instructions in the Python programming language.
EFFECT: stable reproducibility of results when analyzing the number of DNA copies exceeding the sensitivity threshold of the test system.
1 cl, 1 tbl
Title | Year | Author | Number |
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METHOD FOR ASSESSMENT OF CATTLE LEUKEMIA RESISTANCE | 2020 |
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RU2737552C1 |
DIAGNOSTIC TECHNIQUE FOR CATTLE LEUKEMIA VIRUS TOLERANCE | 2010 |
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METHOD TO INCREASE IMMUNE COMPETENCE OF ANIMALS IN CATTLE HERDS | 2010 |
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SELECTION-GENETIC METHOD FOR OBTAINING HIGH-PERFORMANCE AND PERSISTENT LYMPHOCYTOSIS-RESISTANT CATTLE STOCK | 2005 |
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RU2316207C2 |
GRNA FOR GENOMIC EDITING OF ALLELES OF EXON 2 OF BOLA-DRB3 GENE SUSCEPTIBLE TO BOVINE LEUKEMIA VIRUS | 2023 |
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RU2287587C2 |
GENETIC CONSTRUCT FOR PRODUCING BOVINE EMBRYOS RESISTANT TO LEUKEMIA VIRUS | 2020 |
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RU2741092C1 |
METHOD FOR DIAGNOSIS OF CATTLE LEUKEMIA VIRUS | 2018 |
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RU2694966C1 |
METHOD FOR APAF1 POLYMORPHISM DETERMINATION, ASSOCIATED WITH HOLSTEIN CATTLE HH1 FERTILITY HAPLOTYPE | 2016 |
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RU2614117C1 |
METHOD OF DIAGNOSING POLYMORPHISM OF NHLRC2 GENE CAUSING GENETIC DEFECT OF DUPLICATION OF ABERDEEN-ANGUS BREED CATTLE DEVELOPMENT | 2018 |
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RU2715330C2 |
Authors
Dates
2023-11-16—Published
2022-10-28—Filed