SET OF OLIGONUCLEOTIDE PRIMERS AND FLUORESCENT-LABELLED PROBES AND METHOD FOR DETECTING DNA OF AGENTS OF GLANDERS AND MELIOIDOSIS BY PCR METHOD WITH PRODUCT DETECTION IN REAL TIME Russian patent published in 2020 - IPC C12N1/20 

Abstract RU 2738358 C1

FIELD: biotechnology.

SUBSTANCE: invention relates to biotechnology. Disclosed is a set of oligonucleotide primers and fluorescent-labeled probes for PCR-PB, which enables simultaneous detection of bacterial specific B. mallei DNA fragments of the target gene, having the nucleotide sequence SEQ ID No: 1, and bacteria specific B. pseudomallei DNA fragments of the target gene having the nucleotide sequence SEQ ID No: 2. For amplification of specific B. mallei PCR-PB DNA fragments, a set of specific oligonucleotides includes: a direct primer - "BmF" having a nucleotide sequence SEQ ID No: 3, a reverse primer - "BmR", having nucleotide sequence SEQ ID No: 4, fluorescent-labeled probe - "Bm_FAM" having nucleotide sequence SEQ ID No: 7. For amplification of specific DNA fragments of B. pseudomallei PCR-RV set of oligonucleotides includes: direct primer - "BpF", having nucleotide sequence SEQ ID No: 5, reverse primer - "BpR" having nucleotide sequence SEQ ID No: 6, fluorescent-labeled probe - "Bp_Cu5", having nucleotide sequence SEQ Sh№: 8. To detect B. mallei and B. pseudomallei DNA, a reaction is carried out using two pairs of oligonucleotide primers, homologous to fragments of SEQ ID NO: 1 V. mallei and SEQ ID No: 2 B. pseudomallei, as well as two corresponding oligonucleotide TaqMan probes with fluorescent dyes differing by the absorption and emission spectrum, which enables to detect signals from different targets.

EFFECT: present invention enables simultaneous detection of a Burkholderia mallei excipient and a Buriholderia pseudomallei exciter in high-specificity for 2 hours in pure culture samples in concentration of 100 microbial cells/ml.

2 cl, 5 dwg, 2 tbl, 3 ex

Similar patents RU2738358C1

Title Year Author Number
SET OF OLIGONUCLEOTIDE PRIMERS AND FLUORESCENTLY LABELLED PROBE FOR IDENTIFICATION OF Burkholderia mallei AND ITS DIFFERENTIATION FROM Burkholderia pseudomallei 2014
  • Lemasova Ljudmila Viktorovna
  • Savchenko Sergej Sergeevich
  • Tkachenko Galina Aleksandrovna
  • Antonov Valerij Alekseevich
RU2551208C1
FLUORESCENT-MARKED OLIGONUCLEOTIDE PROBE FOR IDENTIFICATION OF GLANDERS AND MELIOIDOSIS AGENTS Bpseudomallei AND Bmallei 2010
  • Tkachenko Galina Aleksandrovna
  • Savchenko Sergej Sergeevich
  • Zinchenko Ol'Ga Vladimirovna
  • Antonov Valerij Alekseevich
  • Alekseeva Viktorija Vladimirovna
RU2435861C1
SET OF OLIGONUCLEOTIDE PRIMERS AND A FLUORESCENT-LABELED PROBE FOR IDENTIFYING RNAS OF BURKHOLDERIA MALLEI SAP EXCRETION AND BURKHOLDERIA PSEUDOMALLEI MELIOIDOSIS BASED ON TRANSCRIPTION AMPLIFICATION (NASBA) IN REAL TIME MODE 2018
  • Ledeneva Margarita Leontevna
  • Tkachenko Galina Aleksandrovna
  • Baturin Artem Aleksandrovich
  • Shpak Ivan Mikhajlovich
RU2699180C1
SET OF OLIGONUCLEOTIDE PRIMERS AND FLUORESCENTLY LABELLED PROBE FOR IDENTIFICATION OF Burkholderia pseudomallei 2014
  • Lemasova Ljudmila Viktorovna
  • Savchenko Sergej Sergeevich
  • Tkachenko Galina Aleksandrovna
  • Antonov Valerij Alekseevich
RU2556810C1
FLUORESCENT-MARKED OLIGONUCLEOTIDE PROBE FOR IDENTIFICATION OF GLANDERS AND MELIOIDOSIS AGENTS Bpseudomallei AND Bmallei 2010
  • Tkachenko Galina Aleksandrovna
  • Savchenko Sergej Sergeevich
  • Zinchenko Ol'Ga Vladimirovna
  • Antonov Valerij Alekseevich
  • Alekseeva Viktorija Vladimirovna
RU2435860C1
OLIGONUCLEOTIDE PROBE FOR IDENTIFICATION OF CAUSATIVE AGENTS OF GLANDERS AND MELIOIDOSIS B. pseudomallei AND B. mallei 2010
  • Tkachenko Galina Aleksandrovna
  • Savchenko Sergej Sergeevich
  • Zinchenko Ol'Ga Vladimirovna
  • Antonov Valerij Alekseevich
  • Alekseeva Viktorija Vladimirovna
RU2439159C1
OLIGONUCLEOTIDE PRIMERS BmVAT5-Ch2s/BmVAT5-Ch2as FOR DETECTING BMAA0107 DIFFERENTIATION FRAGMENT OF EQUINIA AGENT STRAINS 2012
  • Savchenko Sergej Sergeevich
  • Antonov Valerij Alekseevich
  • Ul'Janova Ol'Ga Sergeevna
  • Alekseeva Viktorija Vladimirovna
  • Zinchenko Ol'Ga Viktorovna
  • Tkachenko Galina Aleksandrovna
RU2474620C1
SET OF OLIGONUCLEOTIDE PRIMERS FOR DETECTING VARIANT STRAINS BURKHOLDERIA THAILANDENSIS, CONTAINING CLUSTER OF CAPSULAR POLYSACCHARIDE BIOSYNTHESIS GENES, HIGHLY HOMOLOGOUS BURKHOLDERIA PSEUDOMALLEI 2019
  • Vasileva Kseniya Vitalevna
  • Zakharova Irina Borisovna
RU2728356C1
SET OF FLUORESCENTLY LABELLED OLIGONUCLEOTIDE PROBES FOR TYPING STRAINS OF Burkholderia mallei BY METHOD OF AMPLIFICATION OF DIFFERENTIATING DNA FRAGMENTS 2014
  • Bondareva Ol'Ga Sergeevna
  • Savchenko Sergej Sergeevich
  • Tkachenko Galina Aleksandrovna
  • Ledeneva Margarita Leont'Evna
  • Antonov Valerij Alekseevich
RU2551227C1
OLIGONUCLEOTIDE PRIMERS FOR GENETIC TYPING B. mallei BY POLYMERASE CHAIN REACTION 2012
  • Savchenko Sergej Sergeevich
  • Antonov Valerij Alekseevich
  • Ul'Janova Ol'Ga Sergeevna
  • Alekseeva Viktorija Vladimirovna
  • Zinchenko Ol'Ga Viktorovna
  • Tkachenko Galina Aleksandrovna
RU2474618C1

RU 2 738 358 C1

Authors

Shchit Irina Yurevna

Biketov Sergej Fedorovich

Dates

2020-12-11Published

2019-12-11Filed