FIELD: biotechnology.
SUBSTANCE: invention relates to biotechnology. The invention is a method of creating a circular form of an NGS library for high-throughput sequencing on platforms of DNBSEQ technology, including the following steps: mixing an NGS library and a splint oligonucleotide; ligation of the ends of DNA fragments with DNA ligase enzyme; degradation of non-circular DNA by exonuclease enzymes; purification of the obtained circular DNA fragments. In this case, mixing the NGS library and the splint oligonucleotide is carried out in a solution containing NaCl at a concentration of 10 mM. Before the stage of ligation of the ends of DNA fragments, the reaction mixture is heated according to the following program: at a temperature of 95 °С for 2 minutes, at a temperature of 65 °С for 2 minutes, at a temperature of 40 °С for 2 minutes and at a temperature of 4 °С for at least 1 minute. The duration of the stage of ligation of the ends of DNA fragments is at least 1 hour at a temperature of 37 °С.
EFFECT: invention ensures a reduction in the required amount of DNA of the NGS library for its preparation for sequencing on DNBSEQ platforms by using optimized chemical composition and original temperature control programs. The invention improves the quality of the NGS library and the obtained sequencing data by reducing the number of PCR cycles during the creation of the NGS library.
1 cl, 1 tbl, 1 ex
Title | Year | Author | Number |
---|---|---|---|
METHOD FOR CREATING THE NGS RING FORM OF THE ILLUMINA LIBRARY FOR HIGH-PERFORMANCE SEQUENCING ON DNBSEQ TECHNOLOGY PLATFORMS | 2021 |
|
RU2781613C1 |
METHOD OF MULTIPLEX DETECTION OF TOXIN GENES | 2019 |
|
RU2746100C1 |
LIBRARIES FOR NEXT GENERATION SEQUENCING | 2014 |
|
RU2698125C2 |
METHOD FOR EDITING THE GJB2 GENE TO CORRECT THE PATHOGENIC VARIANT OF c.del35G IN HUMAN CELLS CULTURED IN VITRO | 2021 |
|
RU2780677C1 |
METHOD FOR DETERMINING FOETAL KARYOTYPE OF PREGNANT WOMAN BASED ON SEQUENCING HYBRID READINGS CONSISTING OF SHORT FRAGMENTS OF EXTRACELLULAR DNA | 2019 |
|
RU2717023C1 |
METHOD OF DETERMINING EFFICIENCY OF ENRICHMENT OF NGS LIBRARY WITH EXON SECTIONS FOR SEQUENCING HUMAN EXOME | 2020 |
|
RU2743586C1 |
COMPLEX SYSTEMS OF TRANSPOSOME BOUND ON SURFACE | 2020 |
|
RU2790295C2 |
METHODS AND COMPOSITIONS FOR OBTAINMENT OF NUCLEIC ACID LIBRARIES | 2018 |
|
RU2788402C2 |
PANEL AND METHOD OF OBTAINING SPATIAL INFORMATION ABOUT NUCLEIC ACIDS | 2020 |
|
RU2803202C2 |
METHOD FOR EDITING DNA IN AN ACELLULAR SYSTEM | 2019 |
|
RU2766717C1 |
Authors
Dates
2021-04-22—Published
2020-09-23—Filed